The detailed information of tRNA gene sequence


Sequence ID>WENV170000642
Genome IDAFSR01001284
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 31719
End posion on genome 31634
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tacccctact
tRNA gene sequence 
GGAGGAATCGCCTAATTGGTATGGCAGCAGTCTTGAAAACTGCCGGGCGCAAGCCTGTGG
GGGTTCGAGTCCCCCTTCCTCCGCCA
Downstream region at tRNA end position 
cacttccttc
Secondary structure (Cloverleaf model)
>WENV170000642	Ser	TGA
                   t      GCCA cacttccttc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     C C C C C     A
      T A A        C      | | | | |     G
    T       T C C G       G G G G G     C
    G         | | |                 T T
    G       T G G C
      T A          A     CGGGCGCAAGCCTGT
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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