The detailed information of tRNA gene sequence


Sequence ID>WENV170000644
Genome IDAFSR01001292
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 1033
End posion on genome 1123
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtcccagttT
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGTCTAGTGCGCTCGCCTGGAAAGCGGGTAGGGTTAACAGCCC
TCGCGGGTTCGAATCCCGCCCTCTCCGCCC
Downstream region at tRNA end position 
ttcctttctg
Secondary structure (Cloverleaf model)
>WENV170000644	Ser	GGA
                   T      GCCC ttcctttctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G C G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TAGGGTTAACAGCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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