The detailed information of tRNA gene sequence


Sequence ID>WENV170000677
Genome IDAFSR01001387
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 1991
End posion on genome 2080
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttgttctaa
tRNA gene sequence 
CGAAAGGTGGCCGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGCTGTGGGGCTCTGTCCT
CACCGTGAGTTCGAATCTCACCCTTTCCGCtg
Downstream region at tRNA end position 
gcacacgctc
Secondary structure (Cloverleaf model)
>WENV170000677	Ser	TGA
                   a      GCtg gcacacgctc
                     C   C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTGGGGCTCTGTCCTCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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