The detailed information of tRNA gene sequence


Sequence ID>WENV170000678
Genome IDAFSR01001387
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 2094
End posion on genome 2183
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cacacgctct
tRNA gene sequence 
GGGGAGGTGCCGGAGTGGACGAACGGAGCCGCCTGCTAAGCGGTTGTCTGGGTAAAACCG
GACCCAGGGTTCGAATCCCTGTCTCCCCGCtg
Downstream region at tRNA end position 
tggcccaatc
Secondary structure (Cloverleaf model)
>WENV170000678	Ser	GCT
                   t      GCtg tggcccaatc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    A       A C G G
      C G A        A     TGTCTGGGTAAAACCGGACC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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