The detailed information of tRNA gene sequence


Sequence ID>WENV170000686
Genome IDAFSR01001534
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 1712
End posion on genome 1787
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cggacacagc
tRNA gene sequence 
GGGGACTTAGCTCAGTTGGGAGAGCATCCGCTTTGCAAGCGGGGGGTCAGGGGTTCGAAT
CCCCTAGTCTCCACAA
Downstream region at tRNA end position 
actcggaggc
Secondary structure (Cloverleaf model)
>WENV170000686	Ala	TGC
                   c      ACAA actcggaggc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     T - A          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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