The detailed information of tRNA gene sequence


Sequence ID>WENV170000728
Genome IDAFSR01002560
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 1529
End posion on genome 1604
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaggcgcga
tRNA gene sequence 
AGGCGGGTAGCTCAATTGGCAGAGCAGTGGCCTCCAAATCCACCGGTTGCAGGTTCAAGT
CCTGTCCCGCCTGCCA
Downstream region at tRNA end position 
atttttatac
Secondary structure (Cloverleaf model)
>WENV170000728	Trp	CCA
                   a      GCCA atttttatac
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | | | |     A
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CGGTT
                    G - C
                    T - A
                    G - C
                    G - C
                    C   T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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