The detailed information of tRNA gene sequence


Sequence ID>WENV170000729
Genome IDAFSR01002560
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 1628
End posion on genome 1721
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccagccagtc
tRNA gene sequence 
GGGGGCGTGGCAGAGTCCGGTTTAATGCGTCGGTCTTGAAAACCGAAGGACGTAGCAATG
CGTCCCGTGGGTTCGAATCCCACCGCCCCCTCCA
Downstream region at tRNA end position 
caatctgaca
Secondary structure (Cloverleaf model)
>WENV170000729	Ser	TGA
                   c      TCCA caatctgaca
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G A C G       G T G G G     C
  G           | | |                 T T
  G         A T G C
    T T T A        G     AGGACGTAGCAATGCGTCCC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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