The detailed information of tRNA gene sequence


Sequence ID>WENV170000733
Genome IDAFSR01002788
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 862
End posion on genome 952
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caggatagtc
tRNA gene sequence 
GGAGAGATGCCGGAGTGGTCGAACGGGCCTGACTTGAAATCAGGTAGCCCGCCCAGAGCG
GGCTCGGGGGTTCGAATCCCTCTCTCTCCGCat
Downstream region at tRNA end position 
gcaggtcctg
Secondary structure (Cloverleaf model)
>WENV170000733	Ser	TGA
                   c      GCat gcaggtcctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C C       G G G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TAGCCCGCCCAGAGCGGGCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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