The detailed information of tRNA gene sequence


Sequence ID>WENV170000767
Genome IDAFSR01003767
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 2209
End posion on genome 2118
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttgtagcgg
tRNA gene sequence 
GGTGAGGTGCCCGAGTGGCCGAAGGGGTCAGTTTGCTAAACTGATGTACGGCTGAAAGGC
CGTACCGCGGGTTCGAATCCCGCCCTCACCGCtg
Downstream region at tRNA end position 
gcgaggtgta
Secondary structure (Cloverleaf model)
>WENV170000767	Ser	GCT
                   g      GCtg gcgaggtgta
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TGTACGGCTGAAAGGCCGTACC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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