The detailed information of tRNA gene sequence


Sequence ID>WENV170000806
Genome IDAFSR01005211
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 974
End posion on genome 1061
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cccccaaaga
tRNA gene sequence 
GGAAGGGTGGCAGAGTGGTTGATTGCACCGGTCTTGAAAACCGGAGACGGGGCAACCCGT
CCGTGGGTTCGAATCCCACCCCTTCCGCtg
Downstream region at tRNA end position 
cgcccatttt
Secondary structure (Cloverleaf model)
>WENV170000806	Ser	TGA
                   a      GCtg cgcccatttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      T G A        A     AGACGGGGCAACCCGTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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