The detailed information of tRNA gene sequence


Sequence ID>WENV170000814
Genome IDAFSR01005472
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 4697
End posion on genome 4607
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataggcctac
tRNA gene sequence 
GGAGAGGTAGCATAGCCCGGTCTAATGCGCGCGCCTGGAGAGCGCGTGGGCCTGAACAAG
GCCTCGCAGGTTCAAATCCTGTCCTCTCCGCtt
Downstream region at tRNA end position 
ttttattccc
Secondary structure (Cloverleaf model)
>WENV170000814	Ser	GGA
                   c      GCtt ttttattccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
    C C G A        A      + | | | |     A
  C         T A C G       G C A G G     C
  G         | | | |                 T T
  G         A T G C
    T C T A        G     TGGGCCTGAACAAGGCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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