The detailed information of tRNA gene sequence


Sequence ID>WENV170000819
Genome IDAFSR01005611
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 2167
End posion on genome 2258
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcgtagcgcc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCAACGGTTTGCTAAACCGTAGTGGCGCTGAAAGGC
GCCACCGAGGGTTCGAATCCCTCCCTCTCCGCat
Downstream region at tRNA end position 
ctggaagccg
Secondary structure (Cloverleaf model)
>WENV170000819	Ser	GCT
                   c      GCat ctggaagccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     AGTGGCGCTGAAAGGCGCCACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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