The detailed information of tRNA gene sequence


Sequence ID>WENV170000870
Genome IDAFSR01006581
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 10677
End posion on genome 10757
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
cagcacagtt
tRNA gene sequence 
GCCGAAGTGGTGGAATTGGTAGACACGTACGTTTGAGGGGCGTATGGGCAACCGTGGGGG
TTCGAGTCCCCCCTTCGGCACtc
Downstream region at tRNA end position 
ttcttggcgc
Secondary structure (Cloverleaf model)
>WENV170000870	Leu	GAG
                   t      ACtc ttcttggcgc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     G
    T       G G T G       G G G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGGCAACCGT
                    T - A
                    A - T
                    C - G
                    G - C
                    T + G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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