The detailed information of tRNA gene sequence


Sequence ID>WENV170000880
Genome IDAFSR01006797
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 2677
End posion on genome 2601
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cagacggcga
tRNA gene sequence 
CGGGGCGTGGCTCAGCCTGGTAGAGCGCAGCGTTCGGGTCGCTGAGGTCGGTGGTTCAAA
TCCACTCGCCCCGACCA
Downstream region at tRNA end position 
gaattcatcg
Secondary structure (Cloverleaf model)
>WENV170000880	Pro	CGG
                   a      ACCA gaattcatcg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C A C C     A
      C G A        G      + | | | |     A
    C       C T C G       G G T G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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