The detailed information of tRNA gene sequence


Sequence ID>WENV170000920
Genome IDAFSR01007960
Search identical group
Phylum/Class[AFSR] hot springs metagenome; Yellowstone National Park Mushroom and Octopus hot springs
Species
Start position on genome 3438
End posion on genome 3363
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ccatattcgc
tRNA gene sequence 
GCCCTCGTAGCTCAGTGGATAGAGCGCCTCCGTCCTAAGGAGGGCGTCGGGGGTTCGAAT
CCCTCCGAGGGCGCCA
Downstream region at tRNA end position 
aatctttcgg
Secondary structure (Cloverleaf model)
>WENV170000920	Arg	CCT
                   c      GCCA aatctttcgg
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     GCGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  G       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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