The detailed information of tRNA gene sequence


Sequence ID>WENV170001008
Genome IDAGBJ01000439
Search identical group
Phylum/Class[AGBJ] hypersaline lake metagenome; upper interface of the deep-sea hypersaline anoxic lake (DHAL) Thetis located South-East
Species
Start position on genome 1250
End posion on genome 1161
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agtatatgac
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTATGGAGCACGCTTGGAAAGCGTGTGTAGATTAACGTTTA
CCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
tttttaatgg
Secondary structure (Cloverleaf model)
>WENV170001008	Ser	GGA
                   c      GCCA tttttaatgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G       + | | |                 T T
    T       T G G A
      T T A        G     TGTAGATTAACGTTTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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