The detailed information of tRNA gene sequence


Sequence ID>ENV08001822
Genome IDABOG01016334
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 103
End posion on genome 27
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
nntccacggt
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGTCGTAGGTTCGAA
TCCTGCCACTCCGACCA
Downstream region at tRNA end position 
gtatttttca
Secondary structure (Cloverleaf model)
>ENV08001822	Pro	CGG
                   t      ACCA gtatttttca
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | + | | |     G
    C       C T C G       G T A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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