The detailed information of tRNA gene sequence


Sequence ID>ENV08001825
Genome IDABOG01017560
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 22
End posion on genome 105
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gtagatttgc
tRNA gene sequence 
GCAAGGGTAGCCAAGCCTGGAAACGGCGGCGGACTCAAGATCCGCTCTCGTAGGAGTCCG
TGGGTTCAAATCCCTCCCCTTGCAtcg
Downstream region at tRNA end position 
cggnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001825	Leu	CAA
                   c      Atcg cggnnnnnnn
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        A      |   | | |     A
  T         A C C G       G T G G G     C
  G           | | |                 T T
  G         C G G C
    A A A          G     TCTCGTAGGAGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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