The detailed information of tRNA gene sequence


Sequence ID>ENV08001826
Genome IDABOG01018266
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 15
End posion on genome 98
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cgggagatgc
tRNA gene sequence 
GCAAGGGTAGCCAAGCCTGGAAACGGCGGCGGACTCAAGATCCGCTCTCGTAGGAGTCCG
TGGGTTCAAATCCCTCCCCTTGCAtcg
Downstream region at tRNA end position 
cggtgagcgn
Secondary structure (Cloverleaf model)
>ENV08001826	Leu	CAA
                   c      Atcg cggtgagcgn
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        A      |   | | |     A
  T         A C C G       G T G G G     C
  G           | | |                 T T
  G         C G G C
    A A A          G     TCTCGTAGGAGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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