The detailed information of tRNA gene sequence


Sequence ID>ENV08001827
Genome IDABOG01018475
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 21
End posion on genome 97
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
acctaccagc
tRNA gene sequence 
GGTCCCGTAGCTCAACGGGATAGAGCAGCTGACTTCTAATCAGCAGGTTCGGGGTTCGAG
TCCTCGCGGGATCGCCA
Downstream region at tRNA end position 
tttcatttat
Secondary structure (Cloverleaf model)
>ENV08001827	Arg	TCT
                   c      GCCA tttcatttat
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G C T C C     A
      C A A        A      | | + | |     G
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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