The detailed information of tRNA gene sequence


Sequence ID>WENV170001589
Genome IDAGFS01097453
Search identical group
Phylum/Class[AGFS] ant fungus garden metagenome; Atta colombica fungus garden top
Species
Start position on genome 2121
End posion on genome 2215
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atcgaggcgc
tRNA gene sequence 
GGAAGATCGTCATCTCCGGTGAGGTGGCTGGACTTCAAATCCAGTTGGGGCCGCCAGCGG
TCCCGGGCAGGTTCAACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aagtttctct
Secondary structure (Cloverleaf model)
>WENV170001589	SeC(p)	TCA
                   c      GCCA aagtttctct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     A
    G       C T A C       G C A G G     C
    G       | + | |                 T T
    T       G G T G
      G A          G     TTGGGGCCGCCAGCGGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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