The detailed information of tRNA gene sequence


Sequence ID>ENV08001831
Genome IDABOG01019679
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 103
End posion on genome 30
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnntgcaccg
tRNA gene sequence 
GGGCTCGTGGTCTAGTGGTCATGACGCTTCCCTTACAAGGAAGAGGCCGGCGGTTCAACT
CCGCCCGAGCCCACtc
Downstream region at tRNA end position 
aggtcgtcca
Secondary structure (Cloverleaf model)
>ENV08001831	Val	TAC
                   g      ACtc aggtcgtcca
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T C
                    T     C C G C C     A
      T G A        G      | | | | |     A
    G       T C T G       G G C G G     C
    G         | | |                 T T
    T       T G A C
      C A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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