The detailed information of tRNA gene sequence


Sequence ID>WENV170001977
Genome IDAGFT01055758
Search identical group
Phylum/Class[AGFT] ant fungus garden metagenome; Atta colombica fungus garden bottom
Species
Start position on genome 253
End posion on genome 347
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
catcttcaaa
tRNA gene sequence 
GGAAGATCGTCGTCTCCGGTGAGGCGGCCGGATTTCAAATCCGGTTGGGGCCGCCAGCGG
TCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
cnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170001977	SeC(p)	TCA
                   a      GCCA cnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G A          G     TTGGGGCCGCCAGCGGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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