The detailed information of tRNA gene sequence


Sequence ID>ENV08001833
Genome IDABOG01020259
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 85
End posion on genome 8
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgcccgtgT
tRNA gene sequence 
GGGCCTTTAGCTTAGTCTGGTCAAAGCGCCCGGCTCATAACCGGGTGATCGATGGTTCAA
ATCCGTCAAGGCCCATCt
Downstream region at tRNA end position 
ggtggcnnnn
Secondary structure (Cloverleaf model)
>ENV08001833	Met	CAT
                   T      ATCt ggtggcnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     C T G C C     A
    C T G A        A      | | + | |     A
  T         T T C G       G A T G G     C
  G         | | | |                 T T
  G         A A G C
    T C A          G     TGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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