The detailed information of tRNA gene sequence


Sequence ID>WENV170002190
Genome IDAGSF01000092
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 3226
End posion on genome 3154
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
taaattcctt
tRNA gene sequence 
GCTGCTTTAGCTCAGTTGGTAGAGCGGTTCACTCGTAATGAACAGGCCGTCGGTTCAAGT
CCGATAAGCAGCTttt
Downstream region at tRNA end position 
tgatttcaaa
Secondary structure (Cloverleaf model)
>WENV170002190	Thr	CGT
                   t      Tttt tgatttcaaa
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     T A G C C     A
      T G A        A      + | | | |     A
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    G - C
                    T - A
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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