The detailed information of tRNA gene sequence


Sequence ID>WENV170002205
Genome IDAGSF01000607
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 4102
End posion on genome 4176
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agaaaagcga
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGGAGTTCAAA
TCCCCTCCCCGCCACtt
Downstream region at tRNA end position 
tatgatttct
Secondary structure (Cloverleaf model)
>WENV170002205	Met	CAT
                   a      ACtt tatgatttct
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | |   |     A
    C       C G A G       A G G A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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