The detailed information of tRNA gene sequence


Sequence ID>WENV170002225
Genome IDAGSF01000936
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 11079
End posion on genome 11152
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcaaaaacga
tRNA gene sequence 
GGGACAGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAG
CCCCGTCTGTCCCGttc
Downstream region at tRNA end position 
tctcgtaaat
Secondary structure (Cloverleaf model)
>WENV170002225	Asp	GTC
                   a      Gttc tctcgtaaat
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          C G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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