The detailed information of tRNA gene sequence


Sequence ID>WENV170002240
Genome IDAGSF01001047
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 2341
End posion on genome 2268
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cctcacctgt
tRNA gene sequence 
GCGCTCTTAGTTCAGTTGGTAGAACGCAGGTCTCCAAAACCTGATGTCGGGGGTTCAAGT
CCTCCAGGGCGCGCtg
Downstream region at tRNA end position 
aatcaccaaa
Secondary structure (Cloverleaf model)
>WENV170002240	Trp	CCA
                   t      GCtg aatcaccaaa
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T G
                    T     C C T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G G G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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