The detailed information of tRNA gene sequence


Sequence ID>WENV170002243
Genome IDAGSF01001095
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 5571
End posion on genome 5641
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctgacgtgac
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTCCACCCCCAGTTCAAATCT
GGGTGCCGCCTttt
Downstream region at tRNA end position 
ttaattcgtg
Secondary structure (Cloverleaf model)
>WENV170002243	Cys	GCA
                   c      Tttt ttaattcgtg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     A
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CACC
                    G - C
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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