The detailed information of tRNA gene sequence


Sequence ID>WENV170002256
Genome IDAGSF01001548
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 4267
End posion on genome 4337
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctgacgtgac
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTCCACCCCCAGTTCAAATCT
GGGTGCCGCCTttt
Downstream region at tRNA end position 
ttaattcgtg
Secondary structure (Cloverleaf model)
>WENV170002256	Cys	GCA
                   c      Tttt ttaattcgtg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     A
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CACC
                    G - C
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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