The detailed information of tRNA gene sequence


Sequence ID>WENV170002263
Genome IDAGSF01001935
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 1234
End posion on genome 1143
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgatcagttT
tRNA gene sequence 
GGAGAGGTGGCAGAGTTGGTCGAATGCGACACACTCGAAATGTGTTAGGGGCTTTACGGT
TCCTCGTGGGTTCGAATCCCACCCTCTCCGTtt
Downstream region at tRNA end position 
ttcttttgat
Secondary structure (Cloverleaf model)
>WENV170002263	Ser	CGA
                   T      GTtt ttcttttgat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G           | | |                 T T
  T         A T G C
    C G A          G     TAGGGGCTTTACGGTTCCTC
                    A - T
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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