The detailed information of tRNA gene sequence


Sequence ID>WENV170002285
Genome IDAGSF01004616
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 189
End posion on genome 113
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgaccgactt
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTTGGTTCGAG
ACCAACCAGACCCACCA
Downstream region at tRNA end position 
atgtcgtcaa
Secondary structure (Cloverleaf model)
>WENV170002285	Ile	GAT
                   t      ACCA atgtcgtcaa
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          A G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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