The detailed information of tRNA gene sequence


Sequence ID>WENV170002288
Genome IDAGSF01004828
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 1295
End posion on genome 1368
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcaaaaacga
tRNA gene sequence 
GGGACAGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAG
CCCCGTCTGTCCCGttc
Downstream region at tRNA end position 
tctcgtaaat
Secondary structure (Cloverleaf model)
>WENV170002288	Asp	GTC
                   a      Gttc tctcgtaaat
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          C G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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