The detailed information of tRNA gene sequence


Sequence ID>WENV170002292
Genome IDAGSF01005501
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 316
End posion on genome 402
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attcaaattT
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTGAAGGCGCACGCCTGGAAAGTGTGTTTAGGGCAACTTAAC
GAGGGTTCGAATCCCTCCCTCTCCGTtg
Downstream region at tRNA end position 
aatcttgttc
Secondary structure (Cloverleaf model)
>WENV170002292	Ser	GGA
                   T      GTtg aatcttgttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TTTAGGGCAACTTAAC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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