The detailed information of tRNA gene sequence


Sequence ID>WENV170002297
Genome IDAGSF01006590
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 1564
End posion on genome 1493
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
aatttttgat
tRNA gene sequence 
GCCCGTGTAACTCAGTGGTAGAGTACCTCCTTGGTAAGGAGGAAGTCACGAGTTCAAATC
TCGTCACGGGCTttt
Downstream region at tRNA end position 
aagagactat
Secondary structure (Cloverleaf model)
>WENV170002297	Thr	GGT
                   t      Tttt aagagactat
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A
                     G - C          T A
                    T     T G C T C     A
        G A        A      | | | | |     A
      T     C T C A       A C G A G     C
      G     | | | |                 T T
      G     G A G T
        T A        A     AAGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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