The detailed information of tRNA gene sequence


Sequence ID>WENV170002329
Genome IDAGSF01014999
Search identical group
Phylum/Class[AGSF] microbial mat metagenome; purple microbial (photo and chemo synthetic) mats found in low oxygen high sulfur sink holes
Species
Start position on genome 312
End posion on genome 236
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gttcgtatgt
tRNA gene sequence 
CGGGGTGTGGCTCAGCCTGGTAGAGCATTGCTTTCGGGAAGCAAGGGTCGCAAGTTCAAA
TCTTGTCACCCCGACCA
Downstream region at tRNA end position 
actttcaaat
Secondary structure (Cloverleaf model)
>WENV170002329	Pro	CGG
                   t      ACCA actttcaaat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T T C     A
      C G A        G      + | | | |     A
    C       C T C G       G C A A G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    T - A
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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