The detailed information of tRNA gene sequence


Sequence ID>ENV08001836
Genome IDABOG01022050
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 5
End posion on genome 78
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnnnnngtgc
tRNA gene sequence 
GCCGTCTTAGCTCAGCCTGGGAGAGCACTCGACTGAAGATCGAGCTGTCCCCGGTTCAAA
TCCGGGAGACGGCAtcc
Downstream region at tRNA end position 
cccacgctgt
Secondary structure (Cloverleaf model)
>ENV08001836	Phe	GAA
                   c      Atcc cccacgctgt
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A          T A
                    T     G G G C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C C G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     CTGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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