The detailed information of tRNA gene sequence


Sequence ID>ENV08001843
Genome IDABOG01025921
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 105
End posion on genome 32
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnnnnnntgc
tRNA gene sequence 
GCCGTCTTAGCTCAGCCTGGGAGAGCACTCGACTGAAGATCGAGCTGTCCCCGGTTCAAA
TCCGGGAGACGGCAtcc
Downstream region at tRNA end position 
cccacgctgt
Secondary structure (Cloverleaf model)
>ENV08001843	Phe	GAA
                   c      Atcc cccacgctgt
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A          T A
                    T     G G G C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C C G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     CTGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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