The detailed information of tRNA gene sequence


Sequence ID>ENV08001844
Genome IDABOG01026972
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 90
End posion on genome 16
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atcggcacgT
tRNA gene sequence 
GCCCGGGTGGTGTAGTGGCCTATCATATGTCCCTGTCACGGACATGACACGGGTTCAAAT
CCCGTCTCGGGCGTgc
Downstream region at tRNA end position 
ccggcccgct
Secondary structure (Cloverleaf model)
>ENV08001844	Asp	GTC
                   T      GTgc ccggcccgct
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C          T A
                    T     T G C C C     A
      T G A        G      | | | | |     A
    G       T G T G       A C G G G     C
    G         | | +                 T T
    C       T C A T
      C T A        A     TGAC
                    T - A
                    G - C
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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