The detailed information of tRNA gene sequence


Sequence ID>ENV08001846
Genome IDABOG01029679
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 10
End posion on genome 82
Amino Acid Pseudo
Anticodon GCG
Upstream region at tRNA start position 
ntacatgtga
tRNA gene sequence 
GTCCTGGTAGGGTAGTGGACCATCCTCCTGGCTTGCGGAGCCAGGGACCGGAGTTCAAAT
CTCCGTCAGGACGttc
Downstream region at tRNA end position 
tcgccgaggt
Secondary structure (Cloverleaf model)
>ENV08001846	Pseudo	GCG
                   a      Gttc tcgccgaggt
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C
                     G + T          T A
                    T     G C C T C     A
      T G A        A      | | | | |     A
    G       T G G G       C G G A G     C
    G         | | +                 T T
    A       T C C T
      C C A        C     GGAC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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