The detailed information of tRNA gene sequence


Sequence ID>ENV08001847
Genome IDABOG01029813
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 96
End posion on genome 23
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ctttcggcga
tRNA gene sequence 
GGGCCGGTAGCTCAGTCCGGCAGAGCATCTGACTCTTAATCAGACGGTCGCGCGTTCAAA
TCGCGTCCGGCCCGtgg
Downstream region at tRNA end position 
ttgcaaataa
Secondary structure (Cloverleaf model)
>ENV08001847	Lys	CTT
                   a      Gtgg ttgcaaataa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C G C     A
      T G A        A      + | | | |     A
    C       C T C G       G C G C G     C
    C       | | | |                 T T
    G       G A G C
      G C A        A     CGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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