The detailed information of tRNA gene sequence


Sequence ID>ENV08001848
Genome IDABOG01029839
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 25
End posion on genome 97
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tcctcgtagt
tRNA gene sequence 
GGGCGTGTAGCTCAATGGTAGAGCAGTGGCCTTTTAAGCCATTGGTTGCGGGTTCGATTC
CCTCCACGCTCACtc
Downstream region at tRNA end position 
gtttctttnn
Secondary structure (Cloverleaf model)
>ENV08001848	Lys	TTT
                   t      ACtc gtttctttnn
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T T
                    T     C T C C C     A
        A A        A      |   | | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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