The detailed information of tRNA gene sequence


Sequence ID>ENV08001849
Genome IDABOG01030759
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 93
End posion on genome 20
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
agatagagca
tRNA gene sequence 
GGGCGCGTAGCTCAGTCGGACAGAGCGTCGGACTTCTAATCCGACGGTCGCGGGTTCGAA
TCCCGTCGCGCCCGgtc
Downstream region at tRNA end position 
agtcagcggt
Secondary structure (Cloverleaf model)
>ENV08001849	Arg	TCT
                   a      Ggtc agtcagcggt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A C A        G     CGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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