The detailed information of tRNA gene sequence


Sequence ID>ENV08001852
Genome IDABOG01034369
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 79
End posion on genome 5
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position
tgacgatcag
tRNA gene sequence
GGGTTGGTGGTCTAGTCTGGTTATGACACCTCCTTGACATGGAGGAGACCGGCAGTTCAA
ATCTGCCCCAACCCAtcc
Downstream region at tRNA end position
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001852	Val	GAC
                   g      Atcc tnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C
                     G - C          T A
                    T     C C G T C     A
    C T G A        G      | | | | |     A
  T         T C T G       G G C A G     C
  G           | | |                 T T
  G         T G A C
    T T A          A     AGACC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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