The detailed information of tRNA gene sequence


Sequence ID>ENV08001854
Genome IDABOG01035959
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 23
End posion on genome 97
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gagctgtgag
tRNA gene sequence 
GGGCCTTTAGCTTAGTCTGGTCAAAGCGCCCGGCTCATAACCGGGTGATCGATGGTTCAA
ATCCGTCAAGGCCCAtct
Downstream region at tRNA end position 
ggtggnnnnn
Secondary structure (Cloverleaf model)
>ENV08001854	Met	CAT
                   g      Atct ggtggnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     C T G C C     A
    C T G A        A      | | + | |     A
  T         T T C G       G A T G G     C
  G         | | | |                 T T
  G         A A G C
    T C A          G     TGATC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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