The detailed information of tRNA gene sequence


Sequence ID>ENV08001856
Genome IDABOG01037427
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 101
End posion on genome 28
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnnnnnagca
tRNA gene sequence 
GGGCGCGTAGCTCAGTCGGACAGAGCGTCGGACTTCTAATCCGACGGTCGCGGGTTCGAA
TCCCGTCGCGCCCGgtc
Downstream region at tRNA end position 
agtcaggggt
Secondary structure (Cloverleaf model)
>ENV08001856	Arg	TCT
                   a      Ggtc agtcaggggt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A C A        G     CGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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