The detailed information of tRNA gene sequence


Sequence ID>ENV08001858
Genome IDABOG01038093
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 22
End posion on genome 95
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ccacaggtgc
tRNA gene sequence 
GCCGTCTTAGCTCAGCCTGGGAGAGCACTCGACTGAAGATCGAGCTGTCCCCGGTTCAAA
TCCGGGAGACGGCAtcc
Downstream region at tRNA end position 
ccccacgnnn
Secondary structure (Cloverleaf model)
>ENV08001858	Phe	GAA
                   c      Atcc ccccacgnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A          T A
                    T     G G G C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C C G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     CTGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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