The detailed information of tRNA gene sequence


Sequence ID>WENV170004710
Genome IDAHKK01008990
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 358
End posion on genome 285
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position
taataacact
tRNA gene sequence
GCCTCGGTAGCTTAGCTTGGATGAGCGATTGATTTGTAATCAGTAGGTCGAGGGTTCAAA
TCCCTCCCGAGGCTttc
Downstream region at tRNA end position
tttgtacgtc
Secondary structure (Cloverleaf model)
>WENV170004710	Thr	TGT
                   t      Tttc tttgtacgtc
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    T       T T C G       G A G G G     C
    T       + | | |                 T T
    G       G A G C
      G A T        G     AGGTC
                    A - T
                    T + G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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