The detailed information of tRNA gene sequence


Sequence ID>WENV170004739
Genome IDAHKK01011002
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 254
End posion on genome 180
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caccgtccgg
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGCCAGAGCTGGAGAATCATAATCTCTGAGTCAGGGGTTCGAG
TCCCTTCGCCGCCACtc
Downstream region at tRNA end position 
aggaaacagg
Secondary structure (Cloverleaf model)
>WENV170004739	Met	CAT
                   g      ACtc aggaaacagg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C C A        T     GAGTC
                    G + T
                    G - C
                    A - T
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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