The detailed information of tRNA gene sequence


Sequence ID>WENV170004743
Genome IDAHKK01011366
Search identical group
Phylum/Class[AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga
Species
Start position on genome 488
End posion on genome 414
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taagaataat
tRNA gene sequence 
GGGCGATTAACTCAGTGGGAGAGTGCTACCTTCACACGGTAGAAGTCACTGGTTCAAATC
CAGTATCGCCTACCA
Downstream region at tRNA end position 
gctctgaaaa
Secondary structure (Cloverleaf model)
>WENV170004743	Val	CAC
                   t      ACCA gctctgaaaa
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G A C C     A
        G A        A      | | | | |     A
      T     C T C A       A C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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